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The CMR group at the Institute for Biomedical Engineering develops Magnetic Resonance (MR) technology and methods to assess the cardiovascular system. We devise the next generation of diagnostic tools for quantification of blood flow, organ perfusion, metabolism and function, tissue composition, microstructure and mechanics. The group exploits principles from physics, electrical engineering and computer science to design highly efficient and sensitive imaging and inference approaches to help guide diagnosis and treatment in cardiovascular patients.
Our research has demonstrated approaches to data- and physics-informed synthesis of medical imaging data allowing us to train inference machines and classifiers based on paired ground truth and synthetic imaging data. We capitalize on our previous and current work allowing us to not only acquire MR imaging data of cardiac anatomy and function but also information about cardiac micro-and mesostructures derived from diffusion tensor imaging of the heart along with all parameters determining the measurement process itself.
The position to fill concerns advanced data synthesis (both via machine learning-based generative models and physics simulation) and data inference (including segmentation, classification, parameter inference and mesh fitting) based on data-driven and (bio)physics-informed machine learning principles. The project aims at training and learning using both bottom-up and top-down approaches with applications to cardiac image synthesis, reconstruction and classification. The position is embedded in our overall activities of advancing MR methodology as part of improving decision support in cardiovascular patients.
You hold a first-class MSc degree in computer science, electrical engineering, biomedical engineering, physics or applied mathematics. You should present with expertise in advanced signal and data processing and its applications to cutting-edge imaging. Developing programming skills (Matlab/Python, C(++)) and experience with deep learning frameworks such as PyTorch, TensorFlow, Keras has been in your focus. Further, experience with standard supervised machine learning on image data (classification, segmentation), generative image models (VAEs, GANs, diffusion models), working in the low data regime, working with 3D data, and medical image data is an asset. An innovative spirit and team player skills round off your profile.
Available resources include the full range of programmable experimental and clinical MR equipment (0.6, 1.5, 3T) fully dedicated to research, advanced medical data streaming and processing machines, as well as state-of-the-art local and scalable cloud-based, compute infrastructure (CPU, GPU). Long-standing and very successful cooperations with clinical partners (cardiology, radiology) offer opportunities for testing and data collection in real-world applications.
We look forward to receiving your online application including:
Please note that we exclusively accept applications submitted through our online application portal. Applications via email or postal services will not be considered.
For further information about the position and the group please contact Prof Dr Sebastian Kozerke by e-mail: [email protected] (no applications) or visit our website.
ETH Zürich is well known for its excellent education, ground-breaking fundamental research and for implementing its results directly into practice.
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